Still...you have SEPARATE hookups for charging each battery with the truecharge and MONITORING each battery and DIVERTING current as appropriate. With a single bank charger and no electronic testing and diverting, the TOTAL charge of ALL banks is all the battery charger sees...So... if you have a house bank of 200 amp hours and a 100ah starting battery and you are down 100ah's on your house bank but full on your starting battery...a STANDARD 3 stasge 40 amp charger will see the 300 amp hour total charge down 1/3 and apply a full 40 amps to the total bank...not 1 amp to the starter and 39 to the house.
A bit oversimplified...but that is the reason to use an echocharger if one doesn't have a really sophisticated charger like yours.
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