LH44,
Well, the biggest problem will be developing the repair procedure for putting the exterior skin back in place and having the repaired area perform structurally in a manner similar the surrounding cored laminate.
Baltek/Airex apply a fiberglass surface layer during manufacture of the core to facilitate bonding of the polyester/vinyl ester resins to the core. Polyester and VE resins have notoriously poor adhesion properties to PVC (Airex). By removing the exterior skin you have broken that bond and torn the fiber mat from the airex.
There are
epoxy resins with good bond capabilities to PVC. Now, the skin layups need to be applied with huge edge tapers (20 to 30 to 1) to prevent hard spots in the interface between the repair area to existing laminates. All in all it will (or should be) a very sophisticated repair done by pros that have built cored laminates.
I must add that you stated you chased diesel down an airex seam by removing the exterior skin. So, I am assuming your peeled area exceeds 2 square feet.
Now, your question was about the diesel. It would have had little effect on the core material (Airex) or the fiberglass laminates (refinery storage tanks are protected by fiberglass overlays over carbon steel in the lower 6'' of each tank - read total immersion). Again, the bad actor here will be the effect it will have on the repair. Diesel seepage from the core area will affect secondary bonding to the core and the fiberglass laminates unless it is staunched.
You might want to scare the hell out of yourself and have the tanks tested by soaping them and pulling a small vacuum on them to locate the leak sources. Some material testing labs can do this type of test. Bet you are looking at a hard wall stand alone tank, unless you enjoy diesel taste in your fresh crab.
You would have been better served had they used a much less invasive inspection procedure.
Industrial tank producers have been trying to build cored tank bottoms for years to no positive experiences. I don''t know why a boat builder would think they are any smarter!!